STRINGSTRING
aotJ aotJ aotQ aotQ aotM aotM aotP aotP PA4193 PA4193 PA0313 PA0313 PA1340 PA1340 PA5075 PA5075 PA5155 PA5155 PA3865 PA3865 PA2202 PA2202
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aotJArginine/ornithine binding protein AotJ; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa); Belongs to the bacterial solute-binding protein 3 family. (259 aa)    
Predicted Functional Partners:
aotQ
Arginine/ornithine transport protein AotQ; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa).
 0.998
aotM
Arginine/ornithine transport protein AotM; Product name confidence: Class 1 (Function experimentally demonstrated in P. aeruginosa).
 
 0.998
aotP
Arginine/ornithine transport protein AotP; Part of the arginine-inducible binding-protein-dependent transport system for arginine and ornithine. Probably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily.
 
 
 0.994
PA4193
Probable permease of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 0.944
PA0313
L-cysteine transporter of ABC system YecS; Class 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene.
 
 0.933
PA1340
Amino acid ABC transporter membrane protein; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
 
 0.914
PA5075
Probable permease of ABC transporter; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 0.907
PA5155
Amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein; Product name confidence: Class 1: Function experimentally demonstrated in P. aeruginosa.
  
 0.904
PA3865
Probable amino acid binding protein; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
  
  
 
0.901
PA2202
Probable amino acid permease; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene).
 
 0.871
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: P. aeruginosa PAO1, Pseudomonas aeruginosa PAO1, Pseudomonas sp. PAO1
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